result · source checked
0.9508 AUROC
TransBind · AUROC · genome-wide TF binding sites
- Tested model
- TransBind
- Task or benchmark
- transcription-factor DNA binding-site prediction
- Dataset
- genome-wide TF binding sites
- Procedure
- Integrates protein and DNA embeddings for TFBS prediction on paper test dataset
- Evaluation
- TransBind: transcription-factor DNA binding-site prediction
- Evidence
- Author-reported evaluation · source checkedIntegrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction · Table 2, TransBind row, AUROC column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| TransBind: transcription-factor DNA binding-site prediction Model: TransBind · Benchmark: transcription-factor DNA binding-site prediction · Dataset: genome-wide TF binding sites Integrates protein and DNA embeddings for TFBS prediction on paper test dataset Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.9508 AUROC Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedIntegrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction · Table 2, TransBind row, AUROC column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction · Original source · version of record
Technical metadata and extraction receipts
Stable ID: lit-b4-023
- areas
- molecular-interactions
- tasks
- transcription-factor DNA binding-site prediction
- printed value
- 0.9508
- numeric value
- 0.9508
- metric
- AUROC
- metric direction
- unknown
- unit
- fraction
- uncertainty
- Not reported
- source locator
- Table 2, TransBind row, AUROC column
- review
- method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:58.585Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 2, TransBind row, AUROC column; cell: 0.9508; artifact sha256: 5d777f5925e941b7d087035d5d87e79ef75ae8d6456a770ffe8c527da566fee0; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13145115/fullTextXML
- legacy id
- lit-b4-023
- legacy row
- id: lit-b4-023; paper id: transbind-2026; domain id: molecular-interactions; task: transcription-factor DNA binding-site prediction; model: TransBind; model version: Not reported; dataset: genome-wide TF binding sites; dataset version: Not reported; split: test; metric: AUROC; value: 0.9508; unit: fraction; uncertainty: Not reported; protocol: Integrates protein and DNA embeddings for TFBS prediction on paper test dataset; source locator: Table 2, TransBind row, AUROC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC13145115/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:37:05Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract