BEACON PRS: Programmable RNA switch prediction
Programmable RNA switch prediction. Multi-label Reg at sequence level, scored with R2. Dataset Angenent-Mari's switch set; train/validation/test 73,227/9,153/9,154.
Overview
Programmable RNA switch prediction. Multi-label Reg at sequence level, scored with R2. Dataset Angenent-Mari's switch set; train/validation/test 73,227/9,153/9,154.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluation design
Benchmarks bring together tasks and protocols. A task describes the biological question; a protocol defines a particular test.
Benchmarks
These source-backed links do not make different protocols or scores interchangeable.
Recorded evaluations
Each evaluation records what was tested and under which conditions.
- BEACON-B on BEACON PRS: Programmable RNA switch prediction
- BEACON-B512 on BEACON PRS: Programmable RNA switch prediction
- CNN on BEACON PRS: Programmable RNA switch prediction
- LSTM on BEACON PRS: Programmable RNA switch prediction
- ResNet on BEACON PRS: Programmable RNA switch prediction
- RNA-FM on BEACON PRS: Programmable RNA switch prediction
- RNA-MSM on BEACON PRS: Programmable RNA switch prediction
- RNABERT on BEACON PRS: Programmable RNA switch prediction
- Splice-H510 on BEACON PRS: Programmable RNA switch prediction
- Splice-MS1024 on BEACON PRS: Programmable RNA switch prediction
- Splice-MS510 on BEACON PRS: Programmable RNA switch prediction
- UTR-LM-MRL on BEACON PRS: Programmable RNA switch prediction
Run instructions
No runnable recipe has been reviewed for this task. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.
A task describes a biological question. Choose a linked protocol to obtain concrete split and scoring instructions.
Published comparisons
Explore the results reported under one evaluation protocol. Each figure keeps its source, dataset and metric together; it is not a ranking across studies. The pooled view gathers every source table that reports the same metric and names what it does not hold constant.
BEACON PRS: Programmable RNA switch prediction
r2 (percent) · Higher values are better for this metric.
Every method in BEACON Table 3 on Programmable RNA switch prediction, scored with R2 on Angenent-Mari's switch set with the split 73,227/9,153/9,154.
Evaluation protocol · Angenent-Mari's switch set (BEACON split)
- CNN · Method · Author-reported evaluation45.40(0.66)
- ResNet · Method · Author-reported evaluation55.21(0.28)
- LSTM · Method · Author-reported evaluation55.45(0.71)
- RNA-FM · Configuration · Author-reported evaluation55.98(0.09)
- RNABERT · Configuration · Author-reported evaluation54.60(0.23)
- RNA-MSM · Configuration · Author-reported evaluation56.94(0.38)
- Splice-H510 · Configuration · Author-reported evaluation54.90(3.45)
- Splice-MS510 · Configuration · Author-reported evaluation50.98(7.46)
- Splice-MS1024 · Configuration · Author-reported evaluation57.72(0.45)
- UTR-LM-MRL · Configuration · Author-reported evaluation57.28(0.10)
- UTR-LM-TE&EL · Configuration · Author-reported evaluation53.37(3.54)
- UTRBERT-3mer · Configuration · Author-reported evaluation56.83(0.26)
- UTRBERT-4mer · Configuration · Author-reported evaluation56.43(0.67)
- UTRBERT-5mer · Configuration · Author-reported evaluation57.16(0.08)
- UTRBERT-6mer · Configuration · Author-reported evaluation57.14(0.12)
- BEACON-B · Configuration · Author-reported evaluation54.67(0.36)
- BEACON-B512 · Configuration · Author-reported evaluation55.20(0.26)
Source order is preserved. Plotted marks show point estimates; uncertainty, where reported, is retained in the printed values and table. Differences do not establish statistical significance.
BEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,column(PRS)Values, uncertainty and evidence
| Tested entity | Printed value | Uncertainty | Evidence |
|---|---|---|---|
| CNN · Method | 45.40(0.66) percent | type: standard_deviation; value: 0.66 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(CNN),column(PRS) |
| ResNet · Method | 55.21(0.28) percent | type: standard_deviation; value: 0.28 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(ResNet),column(PRS) |
| LSTM · Method | 55.45(0.71) percent | type: standard_deviation; value: 0.71 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(LSTM),column(PRS) |
| RNA-FM · Configuration | 55.98(0.09) percent | type: standard_deviation; value: 0.09 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(RNA-FM),column(PRS) |
| RNABERT · Configuration | 54.60(0.23) percent | type: standard_deviation; value: 0.23 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(RNABERT),column(PRS) |
| RNA-MSM · Configuration | 56.94(0.38) percent | type: standard_deviation; value: 0.38 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(RNA-MSM),column(PRS) |
| Splice-H510 · Configuration | 54.90(3.45) percent | type: standard_deviation; value: 3.45 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(Splice-H510),column(PRS) |
| Splice-MS510 · Configuration | 50.98(7.46) percent | type: standard_deviation; value: 7.46 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(Splice-MS510),column(PRS) |
| Splice-MS1024 · Configuration | 57.72(0.45) percent | type: standard_deviation; value: 0.45 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(Splice-MS1024),column(PRS) |
| UTR-LM-MRL · Configuration | 57.28(0.10) percent | type: standard_deviation; value: 0.10 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTR-LM-MRL),column(PRS) |
| UTR-LM-TE&EL · Configuration | 53.37(3.54) percent | type: standard_deviation; value: 3.54 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTR-LM-TE&EL),column(PRS) |
| UTRBERT-3mer · Configuration | 56.83(0.26) percent | type: standard_deviation; value: 0.26 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-3mer),column(PRS) |
| UTRBERT-4mer · Configuration | 56.43(0.67) percent | type: standard_deviation; value: 0.67 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-4mer),column(PRS) |
| UTRBERT-5mer · Configuration | 57.16(0.08) percent | type: standard_deviation; value: 0.08 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-5mer),column(PRS) |
| UTRBERT-6mer · Configuration | 57.14(0.12) percent | type: standard_deviation; value: 0.12 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-6mer),column(PRS) |
| BEACON-B · Configuration | 54.67(0.36) percent | type: standard_deviation; value: 0.36 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(BEACON-B),column(PRS) |
| BEACON-B512 · Configuration | 55.20(0.26) percent | type: standard_deviation; value: 0.26 | Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(BEACON-B512),column(PRS) |
Scope and limitations
- Author-reported numbers, source checked but not independently reproduced.
- The Literature SOTA row is excluded: those numbers come from other papers under their own protocols.
- Metrics differ between tasks, so these figures cannot be averaged into one RNA score.
Source transcription and grouping reviewed by automated source review on 2026-09-18. These experiments were not independently reproduced by rewire.
Tested entities and results
Release 2026-09-17-1a18ca2c038a · 17 evaluations · 17 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| BEACON-B on BEACON PRS: Programmable RNA switch prediction Configuration: BEACON-BTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 54.67(0.36)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.36 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(BEACON-B),column(PRS) Source checking is not independent reproduction. |
| BEACON-B512 on BEACON PRS: Programmable RNA switch prediction Configuration: BEACON-B512Task: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 55.20(0.26)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.26 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(BEACON-B512),column(PRS) Source checking is not independent reproduction. |
| CNN on BEACON PRS: Programmable RNA switch prediction Method: CNNTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 45.40(0.66)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.66 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(CNN),column(PRS) Source checking is not independent reproduction. |
| LSTM on BEACON PRS: Programmable RNA switch prediction Method: LSTMTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 55.45(0.71)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.71 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(LSTM),column(PRS) Source checking is not independent reproduction. |
| ResNet on BEACON PRS: Programmable RNA switch prediction Method: ResNetTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 55.21(0.28)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.28 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(ResNet),column(PRS) Source checking is not independent reproduction. |
| RNA-FM on BEACON PRS: Programmable RNA switch prediction Configuration: RNA-FMTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 55.98(0.09)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.09 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(RNA-FM),column(PRS) Source checking is not independent reproduction. |
| RNA-MSM on BEACON PRS: Programmable RNA switch prediction Configuration: RNA-MSMTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 56.94(0.38)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.38 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(RNA-MSM),column(PRS) Source checking is not independent reproduction. |
| RNABERT on BEACON PRS: Programmable RNA switch prediction Configuration: RNABERTTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 54.60(0.23)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.23 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(RNABERT),column(PRS) Source checking is not independent reproduction. |
| Splice-H510 on BEACON PRS: Programmable RNA switch prediction Configuration: Splice-H510Task: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 54.90(3.45)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 3.45 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(Splice-H510),column(PRS) Source checking is not independent reproduction. |
| Splice-MS1024 on BEACON PRS: Programmable RNA switch prediction Configuration: Splice-MS1024Task: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 57.72(0.45)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.45 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(Splice-MS1024),column(PRS) Source checking is not independent reproduction. |
| Splice-MS510 on BEACON PRS: Programmable RNA switch prediction Configuration: Splice-MS510Task: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 50.98(7.46)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 7.46 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(Splice-MS510),column(PRS) Source checking is not independent reproduction. |
| UTR-LM-MRL on BEACON PRS: Programmable RNA switch prediction Configuration: UTR-LM-MRLTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 57.28(0.10)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.10 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTR-LM-MRL),column(PRS) Source checking is not independent reproduction. |
| UTR-LM-TE&EL on BEACON PRS: Programmable RNA switch prediction Configuration: UTR-LM-TE&ELTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 53.37(3.54)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 3.54 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTR-LM-TE&EL),column(PRS) Source checking is not independent reproduction. |
| UTRBERT-3mer on BEACON PRS: Programmable RNA switch prediction Configuration: UTRBERT-3merTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 56.83(0.26)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.26 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-3mer),column(PRS) Source checking is not independent reproduction. |
| UTRBERT-4mer on BEACON PRS: Programmable RNA switch prediction Configuration: UTRBERT-4merTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 56.43(0.67)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.67 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-4mer),column(PRS) Source checking is not independent reproduction. |
| UTRBERT-5mer on BEACON PRS: Programmable RNA switch prediction Configuration: UTRBERT-5merTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 57.16(0.08)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.08 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-5mer),column(PRS) Source checking is not independent reproduction. |
| UTRBERT-6mer on BEACON PRS: Programmable RNA switch prediction Configuration: UTRBERT-6merTask: BEACON PRS: Programmable RNA switch predictionDataset subset: Angenent-Mari's switch set (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 73,227/9,153/9,154; dataset Angenent-Mari's switch set. Author-reported evaluation · Evaluation metadata: source checked | ||
| 57.14(0.12)% r2 Unit: percent · Direction: higher | Uncertainty: type: standard deviation; value: 0.12 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-6mer),column(PRS) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Relationship: part of discovery-benchmark-beacon Individual claims | BEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) Table1,p.6,row(PRS) Version: v2, 12 December 2024 | source checked automated source review · 2026-09-18 Audit detailsPrimary-source transcription with no human sign-off and no independent reproduction. Field: Claim: beacon-association-prs Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
Release 2026-09-17-1a18ca2c038a · Record review: source checked
1 source records and release history
- BEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Original source · v2, 12 December 2024
Technical metadata and extraction receipts
Stable ID: beacon-task-prs
- areas
- rna-transcriptomes
- tasks
- Programmable RNA switch prediction
- metric
- R2
- metric direction
- higher
- task type
- Multi-label Reg
- rna level
- Sequence
- dataset
- Angenent-Mari's switch set
- splits
- 73,227/9,153/9,154
- source locator
- Table1,p.6,row(PRS)
- comparison panels
- id: beacon-panel-prs; title: BEACON PRS: Programmable RNA switch prediction; protocol id: beacon-task-prs; dataset id: beacon-dataset-angenent-mari-s-switch-set; metric: r2; unit: percent; direction: higher; result ids: beacon-result-cnn-prs-r2; beacon-result-resnet-prs-r2; beacon-result-lstm-prs-r2; beacon-result-rna-fm-prs-r2; beacon-result-rnabert-prs-r2; beacon-result-rna-msm-prs-r2; beacon-result-splice-h510-prs-r2; beacon-result-splice-ms510-prs-r2; beacon-result-splice-ms1024-prs-r2; beacon-result-utr-lm-mrl-prs-r2; beacon-result-utr-lm-te-and-el-prs-r2; beacon-result-utrbert-3mer-prs-r2; beacon-result-utrbert-4mer-prs-r2; beacon-result-utrbert-5mer-prs-r2; beacon-result-utrbert-6mer-prs-r2; beacon-result-beacon-b-prs-r2; beacon-result-beacon-b512-prs-r2; source ids: source-beacon-arxiv-2406-10391; source locator: Table3,p.8,column(PRS); context: Every method in BEACON Table 3 on Programmable RNA switch prediction, scored with R2 on Angenent-Mari's switch set with the split 73,227/9,153/9,154.; caveats: Author-reported numbers, source checked but not independently reproduced.; The Literature SOTA row is excluded: those numbers come from other papers under their own protocols.; Metrics differ between tasks, so these figures cannot be averaged into one RNA score.; review: method: automated_source_review; date: 2026-09-18
Related records
- part of: BEACON
- subject: BEACON PRS: part of discovery-benchmark-beacon
- benchmark: BEACON-B on BEACON PRS: Programmable RNA switch prediction
- benchmark: BEACON-B512 on BEACON PRS: Programmable RNA switch prediction
- benchmark: CNN on BEACON PRS: Programmable RNA switch prediction
- benchmark: LSTM on BEACON PRS: Programmable RNA switch prediction
- benchmark: ResNet on BEACON PRS: Programmable RNA switch prediction
- benchmark: RNA-FM on BEACON PRS: Programmable RNA switch prediction
- benchmark: RNA-MSM on BEACON PRS: Programmable RNA switch prediction
- benchmark: RNABERT on BEACON PRS: Programmable RNA switch prediction
- benchmark: Splice-H510 on BEACON PRS: Programmable RNA switch prediction
- benchmark: Splice-MS1024 on BEACON PRS: Programmable RNA switch prediction
- benchmark: Splice-MS510 on BEACON PRS: Programmable RNA switch prediction
- benchmark: UTR-LM-MRL on BEACON PRS: Programmable RNA switch prediction
- benchmark: UTR-LM-TE&EL on BEACON PRS: Programmable RNA switch prediction
- benchmark: UTRBERT-3mer on BEACON PRS: Programmable RNA switch prediction
- benchmark: UTRBERT-4mer on BEACON PRS: Programmable RNA switch prediction
- benchmark: UTRBERT-5mer on BEACON PRS: Programmable RNA switch prediction
- benchmark: UTRBERT-6mer on BEACON PRS: Programmable RNA switch prediction