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benchmark · task

human core-promoter classification

This paper-specific evaluation tests human core-promoter classification using GUE H-CPD.

1 evaluations · 1 metric rows

At a glance

Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.

Data, procedure and scoring
PropertyDescription and evidence
Record typePaper-specific task; protocol incompletely extractedEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column
InputsGUE H-CPDEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column
AssessmentMCCEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column
Recorded split or evaluation settingpaper evaluationEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column
DatasetsNot extracted or verified for this record.
OrganismsNot extracted or verified for this record.
AssaysNot extracted or verified for this record.
AdaptationNot extracted or verified for this record.
BaselinesNot extracted or verified for this record.

How it works

Reported evaluation outline

Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.

Reported evaluation outlineGUE H-CPD. Then: Recorded fitting or scoring procedure. Then: Assess MCCGUE H-CPDRecorded fitting or scoringprocedureAssess MCC
Read the diagram as text
  1. GUE H-CPD
  2. Recorded fitting or scoring procedure
  3. Assess MCC
EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column

Evaluation context

The existing paper extraction describes: DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.

EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column

Tested models and results

Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
DNABERT-2: human core-promoter classification

DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit

Result quoted from another source · Evaluation metadata: needs review

70.52% MCC

Unit: percent · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column

Source checking is not independent reproduction.

Strengths and limitations

Limitations and conditions

Profile review details

Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.

Stable record: reported-task-9f62e739c6371e

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: needs review

Download this release
Technical metadata and extraction receipts

Stable ID: reported-task-9f62e739c6371e

areas
dna-genomes
tasks
human core-promoter classification
entity level
task
version
Not reported
task
human core-promoter classification
scope note
Paper-specific evaluation task; protocol completeness requires further extraction.
missing metadata
protocol version: not_reported_in_legacy_extract
Related records

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