70.52% MCC
DNABERT-2 · MCC · GUE H-CPD
- Tested model
- DNABERT-2
- Task or benchmark
- human core-promoter classification
- Dataset
- GUE H-CPD
- Procedure
- DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit
- Evaluation
- DNABERT-2: human core-promoter classification
- Evidence
- Result quoted from another source · source checkedEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| DNABERT-2: human core-promoter classification DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit Result quoted from another source · Evaluation metadata: needs review | ||
| 70.52% MCC Unit: percent · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Original source · journal full text in PMC
Technical metadata and extraction receipts
Stable ID: b2-eden-genomic-classification-2026
- areas
- dna-genomes
- tasks
- human core-promoter classification
- printed value
- 70.52
- numeric value
- 70.52
- metric
- MCC
- metric direction
- unknown
- unit
- percent
- uncertainty
- Not reported
- source locator
- Table 5, DNABERT-2 row, H-CPD (MCC) column
- review
- method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:37.531Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 5, DNABERT-2 row, H-CPD (MCC) column; cell: 70.52; artifact sha256: 38a6e26b3caffe8e021a2b0b672218e783aca9ee42046765e323946813015e65; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12879454/fullTextXML
- legacy id
- b2-eden-genomic-classification-2026
- legacy row
- id: b2-eden-genomic-classification-2026; paper id: eden-genomic-classification-2026; domain id: dna-genomes; task: human core-promoter classification; model: DNABERT-2; model version: not stated in table; dataset: GUE H-CPD; dataset version: Not reported; split: paper evaluation; metric: MCC; value: 70.52; unit: percent; uncertainty: Not reported; protocol: DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit; source locator: Table 5, DNABERT-2 row, H-CPD (MCC) column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12879454/; evaluation origin: paper_compilation; reviewed utc: 2026-09-15T23:33:26Z
- missing metadata
- dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract
Related records
- evaluation: DNABERT-2: human core-promoter classification
- subject: Reported MCC for DNABERT-2