Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
model · method
DNABERT-2
DNABERT-2 is the method recorded for human core-promoter classification. This page preserves the configuration reported by EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Recorded dataset | GUE H-CPDEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column |
| Recorded split | paper evaluationEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column |
| Recorded configuration | not stated in tableEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column |
| Model type | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
How it works
Recorded evaluation
The imported evaluation describes this procedure: DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit
EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) columnBenchmarks and results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| DNABERT-2: human core-promoter classification DNABERT-2 comparator in consolidated H-CPD table; rerun provenance not explicit Result quoted from another source · Evaluation metadata: needs review | ||
| 70.52% MCC Unit: percent · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedEDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
- This is an evidence-limited profile. The recorded evaluation context does not establish performance on other datasets or configurations.EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Table 5, DNABERT-2 row, H-CPD (MCC) column
Profile review details
Reviewed the existing release record, its source pointer and linked evaluation context. This is not a fresh full-text architecture review or independent reproduction; numerical review status is unchanged.
Stable record: reported-model-2cb8118b4c77c0Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- EDEN: multiscale expected density of nucleotide encoding for enhanced DNA sequence classification with hybrid deep learning · Original source · journal full text in PMC
Technical metadata and extraction receipts
Stable ID: reported-model-2cb8118b4c77c0
- areas
- dna-genomes
- entity level
- method
- version
- not stated in table
- reported name
- DNABERT-2
- missing metadata
- checkpoint revision: not_reported_in_legacy_extract; training data: not_reported_in_legacy_extract; licence: not_reported_in_legacy_extract