Native PDBs
Protein model evaluated by the ProteinBench authors under their harness.
Overview
Protein model evaluated by the ProteinBench authors under their harness.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
Release 2026-09-17-134cd1815de8 · 28 evaluations · 28 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Native PDBs on ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust.Dataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.77 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Diversity Max Clust.↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.30 ± 0.02 pairwise-tm Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 0.02 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Diversity pairwise TM ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Configuration: Native PDBsTask: ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSDDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.67 ± 1.61 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 1.61 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.96 ± 0.10 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.10 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 100, Quality scTM ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust.Dataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.77 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Diversity Max Clust. ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.28 ± 0.02 pairwise-tm Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 0.02 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Diversity pairwise TM ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Configuration: Native PDBsTask: ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSDDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.82 ± 2.67 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 2.67 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.97 ± 0.10 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.10 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 300, Quality scTM ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust.Dataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.66 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Diversity Max Clust. ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.29 ± 0.03 pairwise-tm Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 0.03 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Diversity pairwise TM ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD Configuration: Native PDBsTask: ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSDDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.74 ± 1.45 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 1.45 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.91 ± 0.11 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.11 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 50, Quality scTM ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust.Dataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Diversity Max Clust.↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.29 ± 0.03 pairwise-tm Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 0.03 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Diversity pairwise TM ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD Configuration: Native PDBsTask: ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSDDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 1.07 ± 5.96 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 5.96 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM Configuration: Native PDBsTask: ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTMDataset subset: Designed backbones at fixed lengths (ProteinBench split) Unconditional backbone design at a fixed sequence length. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.97 ± 0.17 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.17 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 3, row(Native PDBs), column(length 500, Quality scTM ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench CO-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust.Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.75 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 100, Diversity Max Clust. ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD Configuration: Native PDBsTask: ProteinBench CO-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSDDataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 2.98 ± 3.49 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 3.49 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 100, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM Configuration: Native PDBsTask: ProteinBench CO-LENGTH-100-QUALITY-SCTM: length 100, Quality scTMDataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.91 ± 0.11 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.11 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 100, Quality scTM ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-200-DIVERSITY-MAX-CLUST: length 200, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench CO-LENGTH-200-DIVERSITY-MAX-CLUST: length 200, Diversity Max Clust.Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.77 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 200, Diversity Max Clust. ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-200-QUALITY-SCRMSD: length 200, Quality scRMSD Configuration: Native PDBsTask: ProteinBench CO-LENGTH-200-QUALITY-SCRMSD: length 200, Quality scRMSDDataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 3.24 ± 3.77 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 3.77 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 200, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-200-QUALITY-SCTM: length 200, Quality scTM Configuration: Native PDBsTask: ProteinBench CO-LENGTH-200-QUALITY-SCTM: length 200, Quality scTMDataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.88 ± 0.09 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.09 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 200, Quality scTM ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust. Configuration: Native PDBsTask: ProteinBench CO-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust.Dataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.75 max-clust Unit: score · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 300, Diversity Max Clust. ↑) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD Configuration: Native PDBsTask: ProteinBench CO-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSDDataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 3.94 ± 4.95 scrmsd Unit: score · Direction: lower | Uncertainty: type: standard deviation; value: 4.95 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 300, Quality scRMSD ↓) Source checking is not independent reproduction. |
| Native PDBs on ProteinBench CO-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM Configuration: Native PDBsTask: ProteinBench CO-LENGTH-300-QUALITY-SCTM: length 300, Quality scTMDataset subset: Co-generated structures and sequences at fixed lengths (ProteinBench split) Joint structure and sequence generation at a fixed length. Values are the mean and standard deviation over repeated runs. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.92 ± 0.12 sctm Unit: score · Direction: higher | Uncertainty: type: standard deviation; value: 0.12 Scored: Not reported · Eligible: Not reported | source checkedproteinbench primary benchmark evidence · Table 5, row(Native PDBs), column(length 300, Quality scTM ↑) Source checking is not independent reproduction. |
Evidence table
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Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
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Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- proteinbench primary benchmark evidence · Original source · 2409.06744v1
Technical metadata and extraction receipts
Stable ID: proteinbench-method-native-pdbs
- areas
- proteins-complexes
- source locator
- Table 3, row(Native PDBs)
- missing metadata
- checkpoint revision: unreported; parameters: unextracted
Related records
- model: Native PDBs on ProteinBench BB-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust.
- model: Native PDBs on ProteinBench BB-LENGTH-100-DIVERSITY-PAIRWISE-TM: length 100, Diversity pairwise TM
- model: Native PDBs on ProteinBench BB-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD
- model: Native PDBs on ProteinBench BB-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM
- model: Native PDBs on ProteinBench BB-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust.
- model: Native PDBs on ProteinBench BB-LENGTH-300-DIVERSITY-PAIRWISE-TM: length 300, Diversity pairwise TM
- model: Native PDBs on ProteinBench BB-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD
- model: Native PDBs on ProteinBench BB-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM
- model: Native PDBs on ProteinBench BB-LENGTH-50-DIVERSITY-MAX-CLUST: length 50, Diversity Max Clust.
- model: Native PDBs on ProteinBench BB-LENGTH-50-DIVERSITY-PAIRWISE-TM: length 50, Diversity pairwise TM
- model: Native PDBs on ProteinBench BB-LENGTH-50-QUALITY-SCRMSD: length 50, Quality scRMSD
- model: Native PDBs on ProteinBench BB-LENGTH-50-QUALITY-SCTM: length 50, Quality scTM
- model: Native PDBs on ProteinBench BB-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust.
- model: Native PDBs on ProteinBench BB-LENGTH-500-DIVERSITY-PAIRWISE-TM: length 500, Diversity pairwise TM
- model: Native PDBs on ProteinBench BB-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD
- model: Native PDBs on ProteinBench BB-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM
- model: Native PDBs on ProteinBench CO-LENGTH-100-DIVERSITY-MAX-CLUST: length 100, Diversity Max Clust.
- model: Native PDBs on ProteinBench CO-LENGTH-100-QUALITY-SCRMSD: length 100, Quality scRMSD
- model: Native PDBs on ProteinBench CO-LENGTH-100-QUALITY-SCTM: length 100, Quality scTM
- model: Native PDBs on ProteinBench CO-LENGTH-200-DIVERSITY-MAX-CLUST: length 200, Diversity Max Clust.
- model: Native PDBs on ProteinBench CO-LENGTH-200-QUALITY-SCRMSD: length 200, Quality scRMSD
- model: Native PDBs on ProteinBench CO-LENGTH-200-QUALITY-SCTM: length 200, Quality scTM
- model: Native PDBs on ProteinBench CO-LENGTH-300-DIVERSITY-MAX-CLUST: length 300, Diversity Max Clust.
- model: Native PDBs on ProteinBench CO-LENGTH-300-QUALITY-SCRMSD: length 300, Quality scRMSD
- model: Native PDBs on ProteinBench CO-LENGTH-300-QUALITY-SCTM: length 300, Quality scTM
- model: Native PDBs on ProteinBench CO-LENGTH-500-DIVERSITY-MAX-CLUST: length 500, Diversity Max Clust.
- model: Native PDBs on ProteinBench CO-LENGTH-500-QUALITY-SCRMSD: length 500, Quality scRMSD
- model: Native PDBs on ProteinBench CO-LENGTH-500-QUALITY-SCTM: length 500, Quality scTM