Amino-acid composition + fixed ridge (FLIP2 Rhomax by_wild_type)
No pretraining; fitted only on this protocol training split. Split is not a claim of homology separation.
Overview
No pretraining; fitted only on this protocol training split. Split is not a claim of homology separation.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
1 evaluation · 2 metric rows. Different protocols are not a single leaderboard.
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Source checking is not independent reproduction. Release 2026-09-22-f58a0f1d267f.
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Evidence
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Sources and history
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Release 2026-09-22-f58a0f1d267f · Record review: source checked
1 source records and release history
- Amino-acid composition + fixed ridge: local execution report (20 September 2026) · Original source · ca73fa47136d182f2d4ddb083d084712198fc0e2
Technical metadata and extraction receipts
Stable ID: rewire-local-20260920-configuration-flip2-composition
- areas
- proteins-complexes
- source locator
- model; model_configuration; execution; environment
- configuration
- alpha: 10; features: 40 amino-acid fractions; second component zero for Rhomax; fit intercept: true; target scaling: training-only StandardScaler; validation used: false
- execution
- adapter: CompositionEmbeddings; adapter provenance: implementation: rewire-flip2-composition-v1; role: local learning control; not the published one-hot baseline; training overlap: No pretraining; protocol trains the regression head; batch size: 32; fitting: protocol_owned_probe; inference and fit seconds: 0.012007542005449068; mode: local_adapter; prediction type: embedding
- model
- name: Amino-acid composition + fixed ridge (Rewire control); training overlap: No pretraining; fitted only on this protocol training split. Split is not a claim of homology separation.
- environment
- architecture: arm64; container digest: unreported; container runtime: unreported; platform: macOS-26.6.2-arm64-arm-64bit; python: 3.11.13; rewirebench: 0.4.0; sdk code sha256: fcc5ab65e6753cf29aabbdae231cbb5cdf72a3dd40ba8f109802c33223b33536; sif sha256: unreported
- packages
- numpy: 1.26.4; pandas: 2.3.3; pyarrow: 23.0.1; rewirebench: 0.4.0; scikit-learn: 1.8.0; scipy: 1.15.3
- method role
- procedural control
- training overlap
- No pretraining; fitted only on this protocol training split. Split is not a claim of homology separation.