dataset · needs review
ProteinGym substitutions
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| ESM2 OFS pseudo-perplexity: protein variant fitness prediction Model: ESM2 OFS pseudo-perplexity · Benchmark: protein variant fitness prediction · Dataset: ProteinGym substitutions authors’ zero-shot ESM2 OFS pseudo-perplexity evaluation; aggregate mean across ProteinGym substitution assays Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.403 Spearman rho Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedPseudo-perplexity in One Fell Swoop for Protein Fitness Estimation · Published PDF page 6 (033014-6), Table I, ESM2: OFS PP row, Aggregate mean column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- Pseudo-perplexity in One Fell Swoop for Protein Fitness Estimation · Original source · PRX Life 2025 journal article
Technical metadata and extraction receipts
Stable ID: reported-dataset-9c186c8f4ed3f4
- areas
- proteins-complexes
- version
- Not reported
- split
- aggregate across assays
- missing metadata
- version: not_reported_in_legacy_extract; accession: not_reported_in_legacy_extract