DeepLoc2 Multi (PFMBench split)
The split of DeepLoc2 Multi that PFMBench evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits.
Subset and evaluation context
This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.
Evaluation results
Release 2026-09-17-134cd1815de8 · 12 evaluations · 12 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| DPLM on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: DPLMTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.75759 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(DPLM [ 68 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ESM-2 on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ESM-2Task: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0 .76191 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ESM-2 [ 35 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ESM-C on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ESM-CTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.75395 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ESM-C), column(DL2 M.) Source checking is not independent reproduction. |
| ESM3 on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ESM3Task: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.65853 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ESM3 [ 18 ]), column(DL2 M.) Source checking is not independent reproduction. |
| PGLM on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: PGLMTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.74772 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(PGLM [ 5 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ProstT5 on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ProstT5Task: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.73190 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ProstT5 [ 21 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ProtGPT2 on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ProtGPT2Task: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.70341 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ProtGPT2 [ 12 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ProTrek on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ProTrekTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.83944 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ProTrek [ 56 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ProtST on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ProtSTTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.74886 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ProtST [ 71 ]), column(DL2 M.) Source checking is not independent reproduction. |
| ProtT5 on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: ProtT5Task: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.72624 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(ProtT5 [ 11 ]), column(DL2 M.) Source checking is not independent reproduction. |
| SaProt on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: SaProtTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.74006 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(SaProt [ 55 ]), column(DL2 M.) Source checking is not independent reproduction. |
| VenusPLM on PFMBench DEEPLOC2: DeepLoc2 Multi Configuration: VenusPLMTask: PFMBench DEEPLOC2: DeepLoc2 MultiDataset subset: DeepLoc2 Multi (PFMBench split) Fine-tuned with an adapter under the PFMBench harness; train, validation and test counts are in Table 1. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.73814 f1 Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedpfmbench primary benchmark evidence · Table 3, row(VenusPLM [ 59 ]), column(DL2 M.) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| description The split of DeepLoc2 Multi that PFMBench evaluated on. The upstream dataset release is not catalogued here, so no claim is made that this matches its original splits. Context-only references | pfmbench primary benchmark evidence No field-specific location recorded Version: 2506.14796v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name DeepLoc2 Multi (PFMBench split) Context-only references | pfmbench primary benchmark evidence No field-specific location recorded Version: 2506.14796v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- pfmbench primary benchmark evidence · Original source · 2506.14796v1
Technical metadata and extraction receipts
Stable ID: pfmbench-dataset-deeploc2-multi
- areas
- proteins-complexes
- missing metadata
- version: unreported; url: unextracted
Related records
- dataset: DPLM on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ESM-2 on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ESM-C on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ESM3 on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: PGLM on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ProstT5 on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ProtGPT2 on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ProTrek on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ProtST on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: ProtT5 on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: SaProt on PFMBench DEEPLOC2: DeepLoc2 Multi
- dataset: VenusPLM on PFMBench DEEPLOC2: DeepLoc2 Multi