ProteinGym v1.3 AMFR substitution assay full assay
Score all 2,972 variants in AMFR_HUMAN_Tsuboyama_2023_4G3O with ESM-2 8M masked marginals. This single-assay result is not a full ProteinGym track or suite score.
Evaluation results
1 evaluation · 5 metric rows. Different protocols are not a single leaderboard.
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Source checking is not independent reproduction. Release 2026-09-22-f58a0f1d267f.
Subset and evaluation context
This record describes a particular subset or cohort used in an evaluation. Its results do not describe the full dataset.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
22 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.dataset_id proteingym-dms-substitutions-v1.3 Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.provenance.assay_sha256.AMFR_HUMAN_Tsuboyama_2023_4G3O dd911d925eca79329a496eb6cb7b181ab448e15db244daf1c1f9c01e8a704c2a Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.provenance.data_verification local_bytes_hashed_not_independently_source_verified Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.provenance.expected_hashes_checked ["AMFR_HUMAN_Tsuboyama_2023_4G3O"] Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.provenance.reference_sha256 a8f498011532a74aa9fe556a50555a75e928c5837d19c06a87592ae04049b308 Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.provenance.source_url https://github.com/OATML-Markslab/ProteinGym/tree/144fe22b07dfaeec2b366f2346203a9838a55b4c Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.provenance.upstream_revision 144fe22b07dfaeec2b366f2346203a9838a55b4c Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.selected_assay AMFR_HUMAN_Tsuboyama_2023_4G3O Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_evidence.archive_sha256 3a83766254ac9ac9984ec25cb73c6e010ea4418f5e35f143933e6b6e6473b921 Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_evidence.archive_size_bytes 43021128 Context-only references | ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) coverage; protocol_configuration; provenance Version: ca73fa47136d182f2d4ddb083d084712198fc0e2 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
View linked audit checks and correction history
Release 2026-09-22-f58a0f1d267f · Record review: source checked
1 source records and release history
- ESM-2 8M masked-marginal scoring: local execution report (20 September 2026) · Original source · ca73fa47136d182f2d4ddb083d084712198fc0e2
Technical metadata and extraction receipts
Stable ID: rewire-dataset-proteingym-amfr-v13
- areas
- proteins-complexes
- version
- ProteinGym-v1.3
- dataset id
- proteingym-dms-substitutions-v1.3
- selected assay
- AMFR_HUMAN_Tsuboyama_2023_4G3O
- source locator
- coverage; protocol_configuration; provenance
- test count
- 2972
- split counts
- Not reported
- provenance
- assay sha256: AMFR HUMAN Tsuboyama 2023 4G3O: dd911d925eca79329a496eb6cb7b181ab448e15db244daf1c1f9c01e8a704c2a; data verification: local_bytes_hashed_not_independently_source_verified; expected hashes checked: AMFR_HUMAN_Tsuboyama_2023_4G3O; reference sha256: a8f498011532a74aa9fe556a50555a75e928c5837d19c06a87592ae04049b308; source url: https://github.com/OATML-Markslab/ProteinGym/tree/144fe22b07dfaeec2b366f2346203a9838a55b4c; upstream revision: 144fe22b07dfaeec2b366f2346203a9838a55b4c
- source evidence
- retrieved at: 2026-09-20T20:45:43.949575+00:00; url: https://marks.hms.harvard.edu/proteingym/ProteinGym_v1.3/DMS_ProteinGym_substitutions.zip; archive sha256: 3a83766254ac9ac9984ec25cb73c6e010ea4418f5e35f143933e6b6e6473b921; archive size bytes: 43021128; member: DMS_ProteinGym_substitutions/AMFR_HUMAN_Tsuboyama_2023_4G3O.csv; member sha256: dd911d925eca79329a496eb6cb7b181ab448e15db244daf1c1f9c01e8a704c2a; hash status: observed_download_bytes_not_independently_published_checksums
- subset scope
- All selected test rows; this is not the whole benchmark suite.