Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
model · method
PlantCAD2
PlantCAD2 is the method recorded for cross-species conservation prediction. This page preserves the configuration reported by PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Recorded dataset | Andropogoneae genome-wide conservationPlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry |
| Model type | Not extracted or verified for this record. |
| Known versions | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
How it works
Recorded evaluation
The imported evaluation describes this procedure: Zero-shot score for conserved versus non-conserved sites from alignments of 35 Andropogoneae genomes
PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entryBenchmarks and results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| PlantCAD2: cross-species conservation prediction Model: PlantCAD2 · Benchmark: cross-species conservation prediction · Dataset: Andropogoneae genome-wide conservation Zero-shot score for conserved versus non-conserved sites from alignments of 35 Andropogoneae genomes Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.725 AUROC Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedPlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
- This is an evidence-limited profile. The recorded evaluation context does not establish performance on other datasets or configurations.PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry
Profile review details
Reviewed the existing release record, its source pointer and linked evaluation context. This is not a fresh full-text architecture review or independent reproduction; numerical review status is unchanged.
Stable record: reported-model-65059c3a806306Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Original source · preprint version in PMC
Technical metadata and extraction receipts
Stable ID: reported-model-65059c3a806306
- areas
- dna-genomes
- entity level
- method
- version
- Not reported
- reported name
- PlantCAD2
- missing metadata
- version: not_reported_in_legacy_extract; checkpoint revision: not_reported_in_legacy_extract; training data: not_reported_in_legacy_extract; licence: not_reported_in_legacy_extract