Result

97.7% Recall

Tree-T5: Recall on Held-out human-versus-virus protein classification

Tested configuration: Tree-T5
Protocol: Held-out human-versus-virus protein classification (human-versus-viral protein classification)
Dataset: human and viral proteins
Procedure: Compare protein origin classifiers; T 5 embeddings plus linear/tree models vs ESM 2 fine-tuning and simple controls. UniRef90 deduplication; proteins longer than1,600 residues excluded; UniRef50 clusters assigned80% training and20% test with no cluster shared. Separate four-fold error-analysis experiment not assigned toTable1.
Evaluation: Tree-T5: Held-out human-versus-virus protein classification
Evidence: Author-reported evaluation · source checkedProtein Language Models Expose Viral Immune Mimicry · Table 1, row Tree-T5, column Recall; XML row9 column5

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Evaluation results

Release 2026-09-17-d277315f7d76 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Evaluation setupMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
Tree-T5: Held-out human-versus-virus protein classification Configuration: Tree-T5Protocol: Held-out human-versus-virus protein classification (human-versus-viral protein classification)Dataset: human and viral proteins Compare protein origin classifiers; T 5 embeddings plus linear/tree models vs ESM 2 fine-tuning and simple controls. UniRef90 deduplication; proteins longer than1,600 residues excluded; UniRef50 clusters assigned80% training and20% test with no cluster shared. Separate four-fold error-analysis experiment not assigned toTable1. Author-reported evaluation · Evaluation metadata: needs review
97.7% Recall Unit: percent · Direction: higher	Uncertainty: unreported Scored: Not reported · Eligible: Not reported	source checkedProtein Language Models Expose Viral Immune Mimicry · Table 1, row Tree-T5, column Recall; XML row9 column5 Source checking is not independent reproduction.

Evidence table

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-17-d277315f7d76
Property and statement	Original source and location	Review and provenance
Reported result 97.7 Individual claims	Protein Language Models Expose Viral Immune Mimicry Original source ↗ Table 1, row Tree-T5, column Recall; XML row9 column5 Version: version of record Retrieved: 2026-09-17T07:56:17.192528+00:00	source checked Primary-table transcription and separate automated source review · 2026-09-17 author reported Audit details Source checked does not mean experimentally reproduced. Field: `attributes.printed_value` Source artifact SHA-256: `15250af2f75f70e2b6a3725d00bc7e276ed9d2d4a54f0ae9d6eaabf6be13e4a1` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact

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Sources and history

Release 2026-09-17-d277315f7d76 · Record review: source checked

Protein Language Models Expose Viral Immune Mimicry · Original source · version of record

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Technical metadata and extraction receipts

Stable ID: paper-result-2aafdf0e911ae9cff5

areas: proteins-complexes
tasks: human-versus-viral protein classification
printed value: 97.7
numeric value: 97.7
metric: Recall
metric direction: higher
unit: percent
uncertainty: Not reported
eligible count: Not reported
scored count: Not reported
reported population: Not reported
source locator: Table 1, row Tree-T5, column Recall; XML row9 column5
source occurrences: source id: part2-viral-immune-mimicry-2025; locator: Table 1, row Tree-T5, column Recall; XML row9 column5
review: method: Primary-table transcription and separate automated source review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.
missing metadata: scored count: unreported; eligible count: unextracted; checkpoint revision: unextracted; uncertainty: unreported

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evaluation: Tree-T5: Held-out human-versus-virus protein classification

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