Vina
Exact source-reported configuration or submission label. Family membership, checkpoint identity and aliases have not been inferred.
Overview
Exact source-reported configuration or submission label. Family membership, checkpoint identity and aliases have not been inferred.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
Release 2026-09-19-eb6149e5d766 · 1 evaluation · 4 metric rows. Different protocols are not a single leaderboard. Charts retain each source table’s protocol and dataset.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Vina · Paper-specific Plinder-L95 stereochemistry assessment; Table 1 all entries · Plinder-L95 Configuration: VinaProtocol: Paper-specific Plinder-L95 stereochemistry assessment; Table 1 all entries · Plinder-L95 · docking with ground-truth-centred search boxDataset subset: Plinder-L95 Paper-specific Plinder-L95 stereochemistry assessment; Table 1 all entries Independent external evaluation · Evaluation metadata: discovered | ||
| 100% chirality Unit: percent · Direction: higher Aggregation: percentage of molecules with consistent chirality | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedImproving Stereochemical Limitations in Protein–Ligand Complex Structure Prediction · Table 1 (XML tbl1); row Vina; column chirality; footnote a Source checking is not independent reproduction. |
| 0 angle_rmsd Unit: degree · Direction: lower Aggregation: unreported in Table 1 footnote | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedImproving Stereochemical Limitations in Protein–Ligand Complex Structure Prediction · Table 1 (XML tbl1); row Vina; column angle_rmsd; footnote a Source checking is not independent reproduction. |
| 0 bond_rmsd Unit: angstrom · Direction: lower Aggregation: median | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedImproving Stereochemical Limitations in Protein–Ligand Complex Structure Prediction · Table 1 (XML tbl1); row Vina; column bond_rmsd; footnote a Source checking is not independent reproduction. |
| 2.206 ligand_rmsd Unit: angstrom · Direction: lower Aggregation: median | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedImproving Stereochemical Limitations in Protein–Ligand Complex Structure Prediction · Table 1 (XML tbl1); row Vina; column ligand_rmsd; footnote a Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
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Sources and history
View linked audit checks and correction history
Release 2026-09-19-eb6149e5d766 · Record review: discovered
1 source records and release history
- Improving Stereochemical Limitations in Protein–Ligand Complex Structure Prediction · Original source · version of record
Technical metadata and extraction receipts
Stable ID: acquired-configuration-87313c429ad9c64b2773
- source locator
- Table 1 (XML tbl1); row Vina; column ligand_rmsd; footnote a
- reported configuration
- Vina
- reference kind
- not_a_reference
- missing metadata
- checkpoint revision: unreported; model family: unextracted