evaluation · needs review

PhyloGPN: ClinVar 3-prime UTR variant classification

Evaluation procedure

log-likelihood-ratio scoring

Metadata review: needs review. Unreported conditions prevent automatic comparisons.

Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Evaluated configurationMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
PhyloGPN: ClinVar 3-prime UTR variant classification Model: PhyloGPN · Benchmark: ClinVar 3-prime UTR variant classification · Dataset: ClinVar 3-prime UTR variants log-likelihood-ratio scoring Author-reported evaluation · Evaluation metadata: needs review
0.94 AUROC Unit: fraction · Direction: unknown	Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported	source checkedA Phylogenetic Approach to Genomic Language Modeling · Table 1, 3-prime UTR row, PhyloGPN AUROC column Source checking is not independent reproduction.

Release 2026-09-16-d74d282221a9 · Record review: needs review

Technical metadata and extraction receipts

Stable ID: evaluation-b2-phylogpn-2025

areas: dna-genomes
tasks: ClinVar 3-prime UTR variant classification
origin: author_reported
protocol: log-likelihood-ratio scoring
version: not stated in table
comparison: protocol id: Not reported; dataset version: Not reported; split: paper evaluation; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
missing metadata: dataset version: not_reported_in_legacy_extract

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