DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
Regulatory element identification, absolute accuracy. Scored with Absolute accuracy on ENCODE cCREs against dinucleotide-shuffled backgrounds. Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name.
Overview
Regulatory element identification, absolute accuracy. Scored with Absolute accuracy on ENCODE cCREs against dinucleotide-shuffled backgrounds. Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluation design
Benchmarks bring together tasks and protocols. A task describes the biological question; a protocol defines a particular test.
Benchmarks
These source-backed links do not make different protocols or scores interchangeable.
Recorded evaluations
Each evaluation records what was tested and under which conditions.
- Caduceus (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- Caduceus (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- DNABERT-2 (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- DNABERT-2 (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- GENA-LM (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- GENA-LM (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- HyenaDNA (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- HyenaDNA (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- Mistral-DNA (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- Mistral-DNA (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- Nucleotide Transformer (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- Nucleotide Transformer (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
Run instructions
No runnable recipe has been reviewed for this task. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.
A task describes a biological question. Choose a linked protocol to obtain concrete split and scoring instructions.
Published comparisons
Explore the results reported under one evaluation protocol. Each figure keeps its source, dataset and metric together; it is not a ranking across studies. The pooled view gathers every source table that reports the same metric and names what it does not hold constant.
DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
absolute_accuracy (fraction) · Higher values are better for this metric.
Every method DART-Eval reports on Regulatory element identification, absolute accuracy, scored with Absolute accuracy on ENCODE cCREs against dinucleotide-shuffled backgrounds.
Evaluation protocol · ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split)
- Caduceus (probed) · Configuration · Author-reported evaluation0.726
- Caduceus (fine-tuned) · Configuration · Author-reported evaluation0.903
- DNABERT-2 (probed) · Configuration · Author-reported evaluation0.847
- DNABERT-2 (fine-tuned) · Configuration · Author-reported evaluation0.913
- GENA-LM (probed) · Configuration · Author-reported evaluation0.887
- GENA-LM (fine-tuned) · Configuration · Author-reported evaluation0.909
- HyenaDNA (probed) · Configuration · Author-reported evaluation0.847
- HyenaDNA (fine-tuned) · Configuration · Author-reported evaluation0.877
- Mistral-DNA (probed) · Configuration · Author-reported evaluation0.759
- Mistral-DNA (fine-tuned) · Configuration · Author-reported evaluation0.817
- Nucleotide Transformer (probed) · Configuration · Author-reported evaluation0.819
- Nucleotide Transformer (fine-tuned) · Configuration · Author-reported evaluation0.920
- Probing-head-like (ab initio) · Method · Author-reported evaluation0.846
Source order is preserved. Plotted marks show point estimates; uncertainty, where reported, is retained in the printed values and table. Differences do not establish statistical significance.
DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, column(Absolute accuracy)Values, uncertainty and evidence
| Tested entity | Printed value | Uncertainty | Evidence |
|---|---|---|---|
| Caduceus (probed) · Configuration | 0.726 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Caduceus), column(probed absolute_accuracy) |
| Caduceus (fine-tuned) · Configuration | 0.903 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Caduceus), column(fine-tuned absolute_accuracy) |
| DNABERT-2 (probed) · Configuration | 0.847 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(DNABERT-2), column(probed absolute_accuracy) |
| DNABERT-2 (fine-tuned) · Configuration | 0.913 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(DNABERT-2), column(fine-tuned absolute_accuracy) |
| GENA-LM (probed) · Configuration | 0.887 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(GENA-LM), column(probed absolute_accuracy) |
| GENA-LM (fine-tuned) · Configuration | 0.909 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(GENA-LM), column(fine-tuned absolute_accuracy) |
| HyenaDNA (probed) · Configuration | 0.847 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(HyenaDNA), column(probed absolute_accuracy) |
| HyenaDNA (fine-tuned) · Configuration | 0.877 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(HyenaDNA), column(fine-tuned absolute_accuracy) |
| Mistral-DNA (probed) · Configuration | 0.759 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Mistral-DNA), column(probed absolute_accuracy) |
| Mistral-DNA (fine-tuned) · Configuration | 0.817 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Mistral-DNA), column(fine-tuned absolute_accuracy) |
| Nucleotide Transformer (probed) · Configuration | 0.819 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Nucleotide Transformer), column(probed absolute_accuracy) |
| Nucleotide Transformer (fine-tuned) · Configuration | 0.920 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Nucleotide Transformer), column(fine-tuned absolute_accuracy) |
| Probing-head-like (ab initio) · Method | 0.846 fraction | Not reported | Author-reported evaluation · source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Ab initio Probing-head-like), column(ab initio absolute_accuracy) |
Scope and limitations
- Author-reported numbers, source checked but not independently reproduced.
- The evaluation setting is part of the method name: a zero-shot, probed and fine-tuned run of the same model are different entries.
- Metrics and datasets differ between tasks, so these figures cannot be averaged into one score.
Source transcription and grouping reviewed by automated source review on 2026-09-18. These experiments were not independently reproduced by rewire.
Tested entities and results
Release 2026-09-17-134cd1815de8 · 13 evaluations · 13 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Caduceus (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: Caduceus (fine-tuned)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.903 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Caduceus), column(fine-tuned absolute_accuracy) Source checking is not independent reproduction. |
| Caduceus (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: Caduceus (probed)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.726 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Caduceus), column(probed absolute_accuracy) Source checking is not independent reproduction. |
| DNABERT-2 (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: DNABERT-2 (fine-tuned)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.913 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(DNABERT-2), column(fine-tuned absolute_accuracy) Source checking is not independent reproduction. |
| DNABERT-2 (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: DNABERT-2 (probed)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.847 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(DNABERT-2), column(probed absolute_accuracy) Source checking is not independent reproduction. |
| GENA-LM (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: GENA-LM (fine-tuned)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.909 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(GENA-LM), column(fine-tuned absolute_accuracy) Source checking is not independent reproduction. |
| GENA-LM (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: GENA-LM (probed)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.887 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(GENA-LM), column(probed absolute_accuracy) Source checking is not independent reproduction. |
| HyenaDNA (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: HyenaDNA (fine-tuned)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.877 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(HyenaDNA), column(fine-tuned absolute_accuracy) Source checking is not independent reproduction. |
| HyenaDNA (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: HyenaDNA (probed)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.847 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(HyenaDNA), column(probed absolute_accuracy) Source checking is not independent reproduction. |
| Mistral-DNA (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: Mistral-DNA (fine-tuned)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.817 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Mistral-DNA), column(fine-tuned absolute_accuracy) Source checking is not independent reproduction. |
| Mistral-DNA (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: Mistral-DNA (probed)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.759 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Mistral-DNA), column(probed absolute_accuracy) Source checking is not independent reproduction. |
| Nucleotide Transformer (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: Nucleotide Transformer (fine-tuned)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.920 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Nucleotide Transformer), column(fine-tuned absolute_accuracy) Source checking is not independent reproduction. |
| Nucleotide Transformer (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Configuration: Nucleotide Transformer (probed)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.819 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Nucleotide Transformer), column(probed absolute_accuracy) Source checking is not independent reproduction. |
| Probing-head-like (ab initio) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy Method: Probing-head-like (ab initio)Task: DART-Eval REI-ABS: Regulatory element identification, absolute accuracyDataset subset: ENCODE cCREs against dinucleotide-shuffled backgrounds (DART-Eval split) Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.846 absolute_accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3, row(Ab initio Probing-head-like), column(ab initio absolute_accuracy) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Relationship: part of discovery-benchmark-dart-eval Individual claims | DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA Table 3, column(Absolute accuracy) Version: 2412.05430v1 | source checked automated source review · 2026-09-18 Audit detailsPrimary-source transcription with no human sign-off and no independent reproduction. Field: Claim: dart-eval-association-rei-abs Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Original source · 2412.05430v1
Technical metadata and extraction receipts
Stable ID: dart-eval-task-rei-abs
- areas
- dna-genomes
- tasks
- Regulatory element identification, absolute accuracy
- metric
- Absolute accuracy
- metric direction
- higher
- dataset
- ENCODE cCREs against dinucleotide-shuffled backgrounds
- protocol
- Distinguish ENCODE cCREs from dinucleotide-shuffled background sequences. The setting the model was run in is part of the method name.
- source locator
- Table 3, column(Absolute accuracy)
- comparison panels
- id: dart-eval-panel-rei-abs; title: DART-Eval REI-ABS: Regulatory element identification, absolute accuracy; protocol id: dart-eval-task-rei-abs; dataset id: dart-eval-dataset-encode-ccres-against-dinucleotide-shuffled-backgrounds; metric: absolute_accuracy; unit: fraction; direction: higher; result ids: dart-eval-result-caduceus-probed-rei-abs-absolute-accuracy; dart-eval-result-caduceus-fine-tuned-rei-abs-absolute-accuracy; dart-eval-result-dnabert-2-probed-rei-abs-absolute-accuracy; dart-eval-result-dnabert-2-fine-tuned-rei-abs-absolute-accuracy; dart-eval-result-gena-lm-probed-rei-abs-absolute-accuracy; dart-eval-result-gena-lm-fine-tuned-rei-abs-absolute-accuracy; dart-eval-result-hyenadna-probed-rei-abs-absolute-accuracy; dart-eval-result-hyenadna-fine-tuned-rei-abs-absolute-accuracy; dart-eval-result-mistral-dna-probed-rei-abs-absolute-accuracy; dart-eval-result-mistral-dna-fine-tuned-rei-abs-absolute-accuracy; dart-eval-result-nucleotide-transformer-probed-rei-abs-absolute-accuracy; dart-eval-result-nucleotide-transformer-fine-tuned-rei-abs-absolute-accuracy; dart-eval-result-probing-head-like-ab-initio-rei-abs-absolute-accuracy; source ids: evidence-expansion-p2-evidence-discovery-final-dart-4194b137ba55; source locator: Table 3, column(Absolute accuracy); context: Every method DART-Eval reports on Regulatory element identification, absolute accuracy, scored with Absolute accuracy on ENCODE cCREs against dinucleotide-shuffled backgrounds.; caveats: Author-reported numbers, source checked but not independently reproduced.; The evaluation setting is part of the method name: a zero-shot, probed and fine-tuned run of the same model are different entries.; Metrics and datasets differ between tasks, so these figures cannot be averaged into one score.; review: method: automated_source_review; date: 2026-09-18
Related records
- part of: DART-Eval
- subject: DART-Eval REI-ABS: part of discovery-benchmark-dart-eval
- benchmark: Caduceus (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: Caduceus (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: DNABERT-2 (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: DNABERT-2 (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: GENA-LM (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: GENA-LM (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: HyenaDNA (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: HyenaDNA (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: Mistral-DNA (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: Mistral-DNA (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: Nucleotide Transformer (fine-tuned) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: Nucleotide Transformer (probed) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy
- benchmark: Probing-head-like (ab initio) on DART-Eval REI-ABS: Regulatory element identification, absolute accuracy