Task

NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot

Fitness prediction on ribozyme assays, zero-shot. Scored with Spearman ρ on NABench ribozyme assays. Scored zero-shot across the NABench ribozyme assays.

27 evaluations · 27 metric rows

Overview

Fitness prediction on ribozyme assays, zero-shot. Scored with Spearman ρ on NABench ribozyme assays. Scored zero-shot across the NABench ribozyme assays.

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Evaluation design

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Benchmarks

NABench

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Recorded evaluations

Each evaluation records what was tested and under which conditions.

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Run instructions

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Published comparisons

Explore the results reported under one evaluation protocol. Each figure keeps its source, dataset and metric together; it is not a ranking across studies. The pooled view gathers every source table that reports the same metric and names what it does not hold constant.

Comparison and metric

NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot

spearman (correlation) · Higher values are better for this metric.

Every method NABench reports on Fitness prediction on ribozyme assays, zero-shot, scored with Spearman ρ on NABench ribozyme assays.

Evaluation protocol · NABench ribozyme assays (NABench split)

RNA-FM · Configuration · Author-reported evaluation0.103
LucaOne · Configuration · Author-reported evaluation0.085
RESM · Configuration · Author-reported evaluation0.155
Enformer · Configuration · Author-reported evaluation0.128
GENERator-3B · Configuration · Author-reported evaluation0.082
structRFM · Configuration · Author-reported evaluation0.089
SPACE · Configuration · Author-reported evaluation0.060
N.T.-v2-50m · Configuration · Author-reported evaluation0.083
Evo_1.5_8k_base · Configuration · Author-reported evaluation0.139
Evo2-7B · Configuration · Author-reported evaluation0.101
Crafts · Configuration · Author-reported evaluation0.132
Evo_1_8k_base · Configuration · Author-reported evaluation0.128
Evo_1_8k · Configuration · Author-reported evaluation0.128
BiRNA-BERT · Configuration · Author-reported evaluation0.102
RNAernie · Configuration · Author-reported evaluation0.078
Evo2-7B-base · Configuration · Author-reported evaluation0.093
GENA-LM-large · Configuration · Author-reported evaluation0.072
HyenaDNA · Configuration · Author-reported evaluation0.111
RiNALMo_giga · Configuration · Author-reported evaluation0.084
GenerRNA · Configuration · Author-reported evaluation0.083
Dnabert · Configuration · Author-reported evaluation0.049
AIDO.RNA · Configuration · Author-reported evaluation0.109
N.T.-500m · Configuration · Author-reported evaluation0.082
LucaVirus · Configuration · Author-reported evaluation0.103
N.T.-v2-500m · Configuration · Author-reported evaluation0.064
GenSLM · Configuration · Author-reported evaluation0.057
Dnabert_6 · Configuration · Author-reported evaluation0.061

Source order is preserved. Plotted marks show point estimates; uncertainty, where reported, is retained in the printed values and table. Differences do not establish statistical significance.

NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, column(ribozyme)

Values, uncertainty and evidence

spearman: original source values
Tested entity	Printed value	Uncertainty	Evidence
RNA-FM · Configuration	0.103 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RNA-FM), column(ribozyme)
LucaOne · Configuration	0.085 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(LucaOne), column(ribozyme)
RESM · Configuration	0.155 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RESM), column(ribozyme)
Enformer · Configuration	0.128 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Enformer), column(ribozyme)
GENERator-3B · Configuration	0.082 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GENERator-3B), column(ribozyme)
structRFM · Configuration	0.089 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(structRFM), column(ribozyme)
SPACE · Configuration	0.060 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(SPACE), column(ribozyme)
N.T.-v2-50m · Configuration	0.083 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(N.T.-v2-50m), column(ribozyme)
Evo_1.5_8k_base · Configuration	0.139 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo_1.5_8k_base), column(ribozyme)
Evo2-7B · Configuration	0.101 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo2-7B), column(ribozyme)
Crafts · Configuration	0.132 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Crafts), column(ribozyme)
Evo_1_8k_base · Configuration	0.128 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo_1_8k_base), column(ribozyme)
Evo_1_8k · Configuration	0.128 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo_1_8k), column(ribozyme)
BiRNA-BERT · Configuration	0.102 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(BiRNA-BERT), column(ribozyme)
RNAernie · Configuration	0.078 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RNAernie), column(ribozyme)
Evo2-7B-base · Configuration	0.093 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo2-7B-base), column(ribozyme)
GENA-LM-large · Configuration	0.072 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GENA-LM-large), column(ribozyme)
HyenaDNA · Configuration	0.111 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(HyenaDNA), column(ribozyme)
RiNALMo_giga · Configuration	0.084 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RiNALMo_giga), column(ribozyme)
GenerRNA · Configuration	0.083 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GenerRNA), column(ribozyme)
Dnabert · Configuration	0.049 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Dnabert), column(ribozyme)
AIDO.RNA · Configuration	0.109 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(AIDO.RNA), column(ribozyme)
N.T.-500m · Configuration	0.082 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(N.T.-500m), column(ribozyme)
LucaVirus · Configuration	0.103 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(LucaVirus), column(ribozyme)
N.T.-v2-500m · Configuration	0.064 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(N.T.-v2-500m), column(ribozyme)
GenSLM · Configuration	0.057 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GenSLM), column(ribozyme)
Dnabert_6 · Configuration	0.061 correlation	Not reported	Author-reported evaluation · source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Dnabert_6), column(ribozyme)

Scope and limitations

Author-reported numbers, source checked but not independently reproduced.
Zero-shot, few-shot and supervised cross validation figures come from different protocols and are not comparable to each other.
The per-nucleotide-type figures and the overall figures describe the same runs at different resolutions, so they must not be combined.

Source transcription and grouping reviewed by automated source review on 2026-09-18. These experiments were not independently reproduced by rewire.

Tested entities and results

Release 2026-09-17-134cd1815de8 · 27 evaluations · 27 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.

Evaluation setupMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
AIDO.RNA on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: AIDO.RNATask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.109 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(AIDO.RNA), column(ribozyme) Source checking is not independent reproduction.
BiRNA-BERT on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: BiRNA-BERTTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.102 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(BiRNA-BERT), column(ribozyme) Source checking is not independent reproduction.
Crafts on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: CraftsTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.132 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Crafts), column(ribozyme) Source checking is not independent reproduction.
Dnabert_6 on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: Dnabert_6Task: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.061 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Dnabert_6), column(ribozyme) Source checking is not independent reproduction.
Dnabert on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: DnabertTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.049 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Dnabert), column(ribozyme) Source checking is not independent reproduction.
Enformer on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: EnformerTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.128 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Enformer), column(ribozyme) Source checking is not independent reproduction.
Evo_1.5_8k_base on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: Evo_1.5_8k_baseTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.139 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo_1.5_8k_base), column(ribozyme) Source checking is not independent reproduction.
Evo_1_8k_base on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: Evo_1_8k_baseTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.128 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo_1_8k_base), column(ribozyme) Source checking is not independent reproduction.
Evo_1_8k on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: Evo_1_8kTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.128 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo_1_8k), column(ribozyme) Source checking is not independent reproduction.
Evo2-7B-base on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: Evo2-7B-baseTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.093 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo2-7B-base), column(ribozyme) Source checking is not independent reproduction.
Evo2-7B on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: Evo2-7BTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.101 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(Evo2-7B), column(ribozyme) Source checking is not independent reproduction.
GENA-LM-large on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: GENA-LM-largeTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.072 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GENA-LM-large), column(ribozyme) Source checking is not independent reproduction.
GENERator-3B on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: GENERator-3BTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.082 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GENERator-3B), column(ribozyme) Source checking is not independent reproduction.
GenerRNA on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: GenerRNATask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.083 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GenerRNA), column(ribozyme) Source checking is not independent reproduction.
GenSLM on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: GenSLMTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.057 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(GenSLM), column(ribozyme) Source checking is not independent reproduction.
HyenaDNA on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: HyenaDNATask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.111 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(HyenaDNA), column(ribozyme) Source checking is not independent reproduction.
LucaOne on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: LucaOneTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.085 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(LucaOne), column(ribozyme) Source checking is not independent reproduction.
LucaVirus on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: LucaVirusTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.103 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(LucaVirus), column(ribozyme) Source checking is not independent reproduction.
N.T.-500m on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: N.T.-500mTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.082 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(N.T.-500m), column(ribozyme) Source checking is not independent reproduction.
N.T.-v2-500m on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: N.T.-v2-500mTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.064 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(N.T.-v2-500m), column(ribozyme) Source checking is not independent reproduction.
N.T.-v2-50m on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: N.T.-v2-50mTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.083 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(N.T.-v2-50m), column(ribozyme) Source checking is not independent reproduction.
RESM on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: RESMTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.155 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RESM), column(ribozyme) Source checking is not independent reproduction.
RiNALMo_giga on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: RiNALMo_gigaTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.084 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RiNALMo_giga), column(ribozyme) Source checking is not independent reproduction.
RNA-FM on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: RNA-FMTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.103 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RNA-FM), column(ribozyme) Source checking is not independent reproduction.
RNAernie on NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot Configuration: RNAernieTask: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shotDataset subset: NABench ribozyme assays (NABench split) Scored zero-shot across the NABench ribozyme assays. Author-reported evaluation · Evaluation metadata: source checked
0.078 spearman Unit: correlation · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedNABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Table 7, row(RNAernie), column(ribozyme) Source checking is not independent reproduction.

Evidence table

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Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-17-134cd1815de8
Property and statement	Original source and location	Review and provenance
Relationship: part of discovery-benchmark-nabench Individual claims	NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction Original source ↗ Table 7, column(ribozyme) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 Retrieved: 2026-09-17T08:06:28.183421+00:00	source checked automated source review · 2026-09-18 Audit details Primary-source transcription with no human sign-off and no independent reproduction. Field: `links:part_of:discovery-benchmark-nabench` Claim: nabench-association-zs-corr-ribozyme Source artifact SHA-256: `fefd48d53b1a7eadf9e14db96adacc8e646304c1b592562d9f136f4508941350` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact

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Sources and history

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NABench: Large-Scale Benchmarks of Nucleotide Foundation Models for Fitness Prediction · Original source · Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256

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Stable ID: nabench-task-zs-corr-ribozyme

areas: rna-transcriptomes
tasks: Fitness prediction on ribozyme assays, zero-shot
metric: Spearman ρ
metric direction: higher
dataset: NABench ribozyme assays
protocol: Scored zero-shot across the NABench ribozyme assays.
source locator: Table 7, column(ribozyme)
comparison panels: id: nabench-panel-zs-corr-ribozyme; title: NABench ZS-CORR-RIBOZYME: Fitness prediction on ribozyme assays, zero-shot; protocol id: nabench-task-zs-corr-ribozyme; dataset id: nabench-dataset-nabench-ribozyme-assays; metric: spearman; unit: correlation; direction: higher; result ids: nabench-result-rna-fm-zs-corr-ribozyme-spearman; nabench-result-lucaone-zs-corr-ribozyme-spearman; nabench-result-resm-zs-corr-ribozyme-spearman; nabench-result-enformer-zs-corr-ribozyme-spearman; nabench-result-generator-3b-zs-corr-ribozyme-spearman; nabench-result-structrfm-zs-corr-ribozyme-spearman; nabench-result-space-zs-corr-ribozyme-spearman; nabench-result-n-t-v2-50m-zs-corr-ribozyme-spearman; nabench-result-evo-1-5-8k-base-zs-corr-ribozyme-spearman; nabench-result-evo2-7b-zs-corr-ribozyme-spearman; nabench-result-crafts-zs-corr-ribozyme-spearman; nabench-result-evo-1-8k-base-zs-corr-ribozyme-spearman; nabench-result-evo-1-8k-zs-corr-ribozyme-spearman; nabench-result-birna-bert-zs-corr-ribozyme-spearman; nabench-result-rnaernie-zs-corr-ribozyme-spearman; nabench-result-evo2-7b-base-zs-corr-ribozyme-spearman; nabench-result-gena-lm-large-zs-corr-ribozyme-spearman; nabench-result-hyenadna-zs-corr-ribozyme-spearman; nabench-result-rinalmo-giga-zs-corr-ribozyme-spearman; nabench-result-generrna-zs-corr-ribozyme-spearman; nabench-result-dnabert-zs-corr-ribozyme-spearman; nabench-result-aido-rna-zs-corr-ribozyme-spearman; nabench-result-n-t-500m-zs-corr-ribozyme-spearman; nabench-result-lucavirus-zs-corr-ribozyme-spearman; nabench-result-n-t-v2-500m-zs-corr-ribozyme-spearman; nabench-result-genslm-zs-corr-ribozyme-spearman; nabench-result-dnabert-6-zs-corr-ribozyme-spearman; source ids: evidence-expansion-nabench-fefd48d5; source locator: Table 7, column(ribozyme); context: Every method NABench reports on Fitness prediction on ribozyme assays, zero-shot, scored with Spearman ρ on NABench ribozyme assays.; caveats: Author-reported numbers, source checked but not independently reproduced.; Zero-shot, few-shot and supervised cross validation figures come from different protocols and are not comparable to each other.; The per-nucleotide-type figures and the overall figures describe the same runs at different resolutions, so they must not be combined.; review: method: automated_source_review; date: 2026-09-18

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