Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
Label projection on CeNGEN (random split), Accuracy. Scored with Accuracy on CeNGEN (random split). 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type).
Overview
Label projection on CeNGEN (random split), Accuracy. Scored with Accuracy on CeNGEN (random split). 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type).
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluation design
Benchmarks bring together tasks and protocols. A task describes the biological question; a protocol defines a particular test.
Benchmarks
These source-backed links do not make different protocols or scores interchangeable.
Recorded evaluations
Each evaluation records what was tested and under which conditions.
- K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- K-neighbors classifier (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Logistic regression (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Logistic regression (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Majority Vote on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Multilayer perceptron (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Multilayer perceptron (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- Random Labels on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- scANVI (All genes) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- scANVI (Seurat v3 2000 HVG) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- scArches+scANVI (All genes) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- scArches+scANVI (Seurat v3 2000 HVG) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
Run instructions
No runnable recipe has been reviewed for this task. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.
A task describes a biological question. Choose a linked protocol to obtain concrete split and scoring instructions.
Published comparisons
Explore the results reported under one evaluation protocol. Each figure keeps its source, dataset and metric together; it is not a ranking across studies. The pooled view gathers every source table that reports the same metric and names what it does not hold constant.
Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
accuracy (fraction) · Higher values are better for this metric.
Every method Open Problems label projection reports on Label projection on CeNGEN (random split), Accuracy, scored with Accuracy on CeNGEN (random split).
Evaluation protocol · CeNGEN (random split) (Open Problems label projection split)
- K-neighbors classifier (log CP10k) · Configuration · Author-reported evaluation0.8492439964423362
- True Labels · Method · Author-reported evaluation1
- Random Labels · Method · Author-reported evaluation0.01655301907303093
- Majority Vote · Configuration · Author-reported evaluation0.048423757288269594
- Multilayer perceptron (log CP10k) · Configuration · Author-reported evaluation0.8575946239747011
- Logistic regression (log CP10k) · Configuration · Author-reported evaluation0.8904041901373654
- K-neighbors classifier (log scran) · Configuration · Author-reported evaluation0.8380274730704615
- XGBoost (log CP10k) · Configuration · Author-reported evaluation0.842474552821425
- Logistic regression (log scran) · Configuration · Author-reported evaluation0.8271568336792173
- Multilayer perceptron (log scran) · Configuration · Author-reported evaluation0.8760252989425833
- Seurat reference mapping (SCTransform) · Configuration · Author-reported evaluation0.8321474453997431
- XGBoost (log scran) · Configuration · Author-reported evaluation0.8207332740389367
- scArches+scANVI (Seurat v3 2000 HVG) · Configuration · Author-reported evaluation0.34884870046447275
- scANVI (Seurat v3 2000 HVG) · Configuration · Author-reported evaluation0.6517936554995553
- scANVI (All genes) · Configuration · Author-reported evaluation0.6659254867081728
- scArches+scANVI (All genes) · Configuration · Author-reported evaluation0.4243996442336199
Source order is preserved. Plotted marks show point estimates; uncertainty, where reported, is retained in the printed values and table. Differences do not establish statistical significance.
openproblems-label primary benchmark evidence · results, dataset(cengen_random), metric(accuracy)Values, uncertainty and evidence
| Tested entity | Printed value | Uncertainty | Evidence |
|---|---|---|---|
| K-neighbors classifier (log CP10k) · Configuration | 0.8492439964423362 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(k_neighbors_classifier), paramset(log CP10k), metric(accuracy) |
| True Labels · Method | 1 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(true_labels), paramset(none), metric(accuracy) |
| Random Labels · Method | 0.01655301907303093 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(random_labels), paramset(none), metric(accuracy) |
| Majority Vote · Configuration | 0.048423757288269594 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(majority_vote), paramset(none), metric(accuracy) |
| Multilayer perceptron (log CP10k) · Configuration | 0.8575946239747011 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(multilayer_perceptron), paramset(log CP10k), metric(accuracy) |
| Logistic regression (log CP10k) · Configuration | 0.8904041901373654 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(logistic_regression), paramset(log CP10k), metric(accuracy) |
| K-neighbors classifier (log scran) · Configuration | 0.8380274730704615 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(k_neighbors_classifier), paramset(log scran), metric(accuracy) |
| XGBoost (log CP10k) · Configuration | 0.842474552821425 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(xgboost), paramset(log CP10k), metric(accuracy) |
| Logistic regression (log scran) · Configuration | 0.8271568336792173 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(logistic_regression), paramset(log scran), metric(accuracy) |
| Multilayer perceptron (log scran) · Configuration | 0.8760252989425833 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(multilayer_perceptron), paramset(log scran), metric(accuracy) |
| Seurat reference mapping (SCTransform) · Configuration | 0.8321474453997431 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(seurat_reference_mapping), paramset(SCTransform), metric(accuracy) |
| XGBoost (log scran) · Configuration | 0.8207332740389367 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(xgboost), paramset(log scran), metric(accuracy) |
| scArches+scANVI (Seurat v3 2000 HVG) · Configuration | 0.34884870046447275 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scarches_scanvi), paramset(Seurat v3 2000 HVG), metric(accuracy) |
| scANVI (Seurat v3 2000 HVG) · Configuration | 0.6517936554995553 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(accuracy) |
| scANVI (All genes) · Configuration | 0.6659254867081728 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scanvi), paramset(All genes), metric(accuracy) |
| scArches+scANVI (All genes) · Configuration | 0.4243996442336199 fraction | Not reported | Author-reported evaluation · source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scarches_scanvi), paramset(All genes), metric(accuracy) |
Scope and limitations
- Results published by the Open Problems project, source checked but not independently reproduced.
- This covers the label projection task at v1.0.0 only, not the whole Open Problems suite.
- true_labels and random_labels are controls that bound the scale, not competing methods.
- Preprocessing is part of the run, so the same method appears once per parameter set.
Source transcription and grouping reviewed by automated source review on 2026-09-18. These experiments were not independently reproduced by rewire.
Tested entities and results
Release 2026-09-17-134cd1815de8 · 16 evaluations · 16 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: K-neighbors classifier (log CP10k)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8492439964423362 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(k_neighbors_classifier), paramset(log CP10k), metric(accuracy) Source checking is not independent reproduction. |
| K-neighbors classifier (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: K-neighbors classifier (log scran)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8380274730704615 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(k_neighbors_classifier), paramset(log scran), metric(accuracy) Source checking is not independent reproduction. |
| Logistic regression (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: Logistic regression (log CP10k)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8904041901373654 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(logistic_regression), paramset(log CP10k), metric(accuracy) Source checking is not independent reproduction. |
| Logistic regression (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: Logistic regression (log scran)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8271568336792173 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(logistic_regression), paramset(log scran), metric(accuracy) Source checking is not independent reproduction. |
| Majority Vote on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: Majority VoteTask: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.048423757288269594 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(majority_vote), paramset(none), metric(accuracy) Source checking is not independent reproduction. |
| Multilayer perceptron (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: Multilayer perceptron (log CP10k)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8575946239747011 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(multilayer_perceptron), paramset(log CP10k), metric(accuracy) Source checking is not independent reproduction. |
| Multilayer perceptron (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: Multilayer perceptron (log scran)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8760252989425833 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(multilayer_perceptron), paramset(log scran), metric(accuracy) Source checking is not independent reproduction. |
| Random Labels on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Method: Random LabelsTask: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.01655301907303093 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(random_labels), paramset(none), metric(accuracy) Source checking is not independent reproduction. |
| scANVI (All genes) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: scANVI (All genes)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.6659254867081728 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scanvi), paramset(All genes), metric(accuracy) Source checking is not independent reproduction. |
| scANVI (Seurat v3 2000 HVG) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: scANVI (Seurat v3 2000 HVG)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.6517936554995553 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scanvi), paramset(Seurat v3 2000 HVG), metric(accuracy) Source checking is not independent reproduction. |
| scArches+scANVI (All genes) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: scArches+scANVI (All genes)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.4243996442336199 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scarches_scanvi), paramset(All genes), metric(accuracy) Source checking is not independent reproduction. |
| scArches+scANVI (Seurat v3 2000 HVG) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: scArches+scANVI (Seurat v3 2000 HVG)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.34884870046447275 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(scarches_scanvi), paramset(Seurat v3 2000 HVG), metric(accuracy) Source checking is not independent reproduction. |
| Seurat reference mapping (SCTransform) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: Seurat reference mapping (SCTransform)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8321474453997431 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(seurat_reference_mapping), paramset(SCTransform), metric(accuracy) Source checking is not independent reproduction. |
| True Labels on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Method: True LabelsTask: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 1 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(true_labels), paramset(none), metric(accuracy) Source checking is not independent reproduction. |
| XGBoost (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: XGBoost (log CP10k)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.842474552821425 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(xgboost), paramset(log CP10k), metric(accuracy) Source checking is not independent reproduction. |
| XGBoost (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy Configuration: XGBoost (log scran)Task: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), AccuracyDataset subset: CeNGEN (random split) (Open Problems label projection split) 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type). Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.8207332740389367 accuracy Unit: fraction · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedopenproblems-label primary benchmark evidence · results, dataset(cengen_random), method(xgboost), paramset(log scran), metric(accuracy) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Relationship: part of discovery-benchmark-open-problems Individual claims | openproblems-label primary benchmark evidence results, dataset(cengen_random), metric(accuracy) Version: v1.0.0 | source checked automated source review · 2026-09-18 Audit detailsPrimary-source transcription with no human sign-off and no independent reproduction. Field: Claim: open-problems-association-cengen-random-accuracy Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
Download this releaseTechnical metadata and extraction receipts
Stable ID: open-problems-task-cengen-random-accuracy
- areas
- cells-tissues
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- Label projection on CeNGEN (random split), Accuracy
- metric
- Accuracy
- metric direction
- higher
- dataset
- CeNGEN (random split)
- protocol
- 100k FACS-isolated C. elegans neurons from 17 experiments sequenced on 10x Genomics. Split into train/test randomly. Dimensions: 100955 cells, 22469 genes. 169 cell types avg. 597±800 cells per cell type).
- source locator
- results, dataset(cengen_random), metric(accuracy)
- comparison panels
- id: open-problems-panel-cengen-random-accuracy; title: Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy; protocol id: open-problems-task-cengen-random-accuracy; dataset id: open-problems-dataset-cengen-random-split; metric: accuracy; unit: fraction; direction: higher; result ids: open-problems-result-k-neighbors-classifier-log-cp10k-cengen-random-accuracy-accuracy; open-problems-result-true-labels-cengen-random-accuracy-accuracy; open-problems-result-random-labels-cengen-random-accuracy-accuracy; open-problems-result-majority-vote-cengen-random-accuracy-accuracy; open-problems-result-multilayer-perceptron-log-cp10k-cengen-random-accuracy-accuracy; open-problems-result-logistic-regression-log-cp10k-cengen-random-accuracy-accuracy; open-problems-result-k-neighbors-classifier-log-scran-cengen-random-accuracy-accuracy; open-problems-result-xgboost-log-cp10k-cengen-random-accuracy-accuracy; open-problems-result-logistic-regression-log-scran-cengen-random-accuracy-accuracy; open-problems-result-multilayer-perceptron-log-scran-cengen-random-accuracy-accuracy; open-problems-result-seurat-reference-mapping-sctransform-cengen-random-accuracy-accuracy; open-problems-result-xgboost-log-scran-cengen-random-accuracy-accuracy; open-problems-result-scarches-plus-scanvi-seurat-v3-2000-hvg-cengen-random-accuracy-accuracy; open-problems-result-scanvi-seurat-v3-2000-hvg-cengen-random-accuracy-accuracy; open-problems-result-scanvi-all-genes-cengen-random-accuracy-accuracy; open-problems-result-scarches-plus-scanvi-all-genes-cengen-random-accuracy-accuracy; source ids: expansion-p3-open-problems; source locator: results, dataset(cengen_random), metric(accuracy); context: Every method Open Problems label projection reports on Label projection on CeNGEN (random split), Accuracy, scored with Accuracy on CeNGEN (random split).; caveats: Results published by the Open Problems project, source checked but not independently reproduced.; This covers the label projection task at v1.0.0 only, not the whole Open Problems suite.; true_labels and random_labels are controls that bound the scale, not competing methods.; Preprocessing is part of the run, so the same method appears once per parameter set.; review: method: automated_source_review; date: 2026-09-18
Related records
- part of: Open Problems
- subject: Open Problems label projection CENGEN-RANDOM-ACCURACY: part of discovery-benchmark-open-problems
- benchmark: K-neighbors classifier (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: K-neighbors classifier (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Logistic regression (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Logistic regression (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Majority Vote on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Multilayer perceptron (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Multilayer perceptron (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Random Labels on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: scANVI (All genes) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: scANVI (Seurat v3 2000 HVG) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: scArches+scANVI (All genes) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: scArches+scANVI (Seurat v3 2000 HVG) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: Seurat reference mapping (SCTransform) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: True Labels on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: XGBoost (log CP10k) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy
- benchmark: XGBoost (log scran) on Open Problems label projection CENGEN-RANDOM-ACCURACY: Label projection on CeNGEN (random split), Accuracy