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Configuration

Original

Original as evaluated in the cited study. Paper-specific evaluated pipeline; exact checkpoint not inferred from label

SourcesEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column Val Accuracy; XML row2 column2

1 evaluation · 7 metric rows

At a glance

Key specifications have not been extracted for this record. See the linked evaluation and sources for the reported setup.

limited source coverage · Automated source review, 2026-09-17. All specifications and missing details

Evaluations and results

Release 2026-09-17-d277315f7d76 · 1 evaluation · 7 metric rows. Different protocols are not a single leaderboard.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
Original: Protective-antigen classification feature comparison

Original 509 features vs ESM 1,280 features vs combined 1,789 features. 372 protection-positive and 3,720 protection-negative samples.

Author-reported evaluation · Evaluation metadata: needs review

0.94 AUROC

Unit: fraction · Direction: higher

Uncertainty: unreported

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column AUROC; XML row2 column8

Source checking is not independent reproduction.

0.96 ± 0.008 Weighted F1

Unit: fraction · Direction: higher

Uncertainty: type: reported plus minus type unresolved; value: 0.008

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column Weighted F1; XML row2 column5

Source checking is not independent reproduction.

0.78 ± 0.046 MCC

Unit: dimensionless · Direction: higher

Uncertainty: type: reported plus minus type unresolved; value: 0.046

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column MCC; XML row2 column6

Source checking is not independent reproduction.

0.84 ± 0.049 AUPRC

Unit: fraction · Direction: higher

Uncertainty: type: reported plus minus type unresolved; value: 0.049

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column AUPRC; XML row2 column7

Source checking is not independent reproduction.

0.74 ± 0.071 Sensitivity

Unit: fraction · Direction: higher

Uncertainty: type: reported plus minus type unresolved; value: 0.071

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column Sensitivity; XML row2 column3

Source checking is not independent reproduction.

0.96 ± 0.008 Val Accuracy

Unit: fraction · Direction: higher

Uncertainty: type: reported plus minus type unresolved; value: 0.008

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column Val Accuracy; XML row2 column2

Source checking is not independent reproduction.

0.99 ± 0.004 Specificity

Unit: fraction · Direction: higher

Uncertainty: type: reported plus minus type unresolved; value: 0.004

Scored: Not reported · Eligible: Not reported

source checkedEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column Specificity; XML row2 column4

Source checking is not independent reproduction.

How it works

Evaluation in this paper

Paper-specific evaluated pipeline; exact checkpoint not inferred from label

SourcesEnhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features · Table 1., row Original, column Val Accuracy; XML row2 column2

Strengths and limitations

Strengths and considerations

No source-reviewed explanatory claims are recorded here yet.

Limitations and conditions

No source-reviewed explanatory claims are recorded here yet.

Profile review details

Primary-source transcription and separate automated review. No human sign-off or experimental reproduction.

Stable record: paper-model-9b728492d4073915c4

Specifications

Inputs, training, access and other details

Explanatory profile: limited source coverage · Automated source review, 2026-09-17. Review applies to the cited claims; unresolved fields are listed below. Numerical results retain their own review status.

Inputs, outputs and configuration
PropertyDescription and evidence
Model typeNot extracted or verified for this record.
InputsNot extracted or verified for this record.
OutputsNot extracted or verified for this record.
ParametersNot extracted or verified for this record.
Known versionsNot extracted or verified for this record.
Training dataNot extracted or verified for this record.
Context limitsNot extracted or verified for this record.
AccessNot extracted or verified for this record.
Code licenceNot extracted or verified for this record.
Weights licenceNot extracted or verified for this record.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-17-d277315f7d76
Property and statementOriginal source and locationReview and provenance
Evaluation in this paper

Paper-specific evaluated pipeline; exact checkpoint not inferred from label

Individual claims
Enhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features

Original source ↗

Table 1., row Original, column Val Accuracy; XML row2 column2

Version: preprint version in PMC
Retrieved: 2026-09-17T07:56:15.123850+00:00

source checked

automated source review · 2026-09-17

Audit details

Primary-source transcription and separate automated review. No human sign-off or experimental reproduction.

Field: attributes.profile.sections.0.body

Source artifact SHA-256: b76fff917addd0e9ff8a2fc843496132ecf832d3ceef248e3edf2dbc78baab5f

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Introduction

Original as evaluated in the cited study. Paper-specific evaluated pipeline; exact checkpoint not inferred from label

Individual claims
Enhancing Vaxign-DL for Vaccine Candidate Prediction with added ESM-Generated Features

Original source ↗

Table 1., row Original, column Val Accuracy; XML row2 column2

Version: preprint version in PMC
Retrieved: 2026-09-17T07:56:15.123850+00:00

source checked

automated source review · 2026-09-17

Audit details

Primary-source transcription and separate automated review. No human sign-off or experimental reproduction.

Field: attributes.profile.summary

Source artifact SHA-256: b76fff917addd0e9ff8a2fc843496132ecf832d3ceef248e3edf2dbc78baab5f

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

Release 2026-09-17-d277315f7d76 · Record review: needs review

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: paper-model-9b728492d4073915c4

areas
proteins-complexes
tasks
vaccine-antigen candidate prediction
entity level
method
configuration type
reported_configuration
version
Paper-specific evaluated pipeline; exact checkpoint not inferred from label
legacy kinds
model
entity classification
review date: 2026-09-17; rationale: This source-scoped entry preserves the method/configuration actually named in an evaluation. It is neither a global family identity nor proof of an immutable checkpoint; the linked evaluation retains adaptation, fitting and scoring details.; source ids: part2-vaxign-esm-2024; source locator: Table 1., row Original, column Val Accuracy; XML row2 column2; ambiguities: Configuration means the source-labelled evaluated identity. It does not establish missing checkpoint hashes, default settings or equivalence to same-named records in other papers.
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